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Persistent processes on Sherlock
by Kilian Cavalotti
There are many cases where having a persistent process (or service) running alongside computing jobs is of great benefit. For instance, when data is stored in a database format to allow for highly efficient queries, jobs that want to...timestamp1539128040001
Running containers on Sherlock
by Kilian Cavalotti
Have you ever wanted to run Docker containers on Sherlock, and skip the hassle of figuring out your application dependencies, installing them, compiling the code, resolving compilation errors, finding missing libraries, or making sure...
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Better error messages when submitting jobs
by Kilian Cavalotti
Sherlock now offers a better and more complete explanation when a job submission is rejected by the scheduler. What does it look like? In the most common cases, jobs that don't meet the requirements for the partition they're submitted...timestamp1533166320001
High priority QOS for owners
by Kilian Cavalotti
Today, we're introducing a new high-priority QOS for owner partitions. In groups which have purchased their own compute nodes on Sherlock, users can now submit jobs to their group partition using the --qos=high_p option: it will give...timestamp1532481060001
Sherlock now welcomes lab-contributed software
by Kilian Cavalotti
Have you ever spent hours compiling and tuning software, put together a complex workflow combining multiple software parts, or just installed the latest version of the brand new software tools you're developing on Sherlock? And wondered...timestamp1532122560001
MySQL on Sherlock
by Kilian Cavalotti
Have you ever wondered how you could use a database server on Sherlock? Or wanted to run jobs that query data from a SQL database? Or even better, multiple jobs that would interact with the same database? Have you ever wanted to store...timestamp1526503380001
Spark on Sherlock
by Kilian Cavalotti
Apache Spark is now available on Sherlock, via the spark module: $ ml spark We also added some new documentation and example job scripts, so if you ever needed to run Spark jobs on Sherlock, please take a look at those and let us know...timestamp1522433700001
Tensorflow 1.7.0 now available
by Sherlock Team
Tensorflow 1.7.0, which features TensorRT integration, is now available on Sherlock 2.0. You can load it on Sherlock with: $ ml py-tensorflow/1.7.0_py27 > NB: As with all the other Tensorflow modules on Sherlock, Tensorflow 1.7.0...timestamp1521162960001
New software modules
by Sherlock Team
If you haven't checked in a while, we're continuing to add more software modules on Sherlock 2.0. Among many others, the following additions will be of particular interest to the bioinformatics and genomics communities: star cufflinks...
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