Sherlock changelog

Status info at login

by Kilian Cavalotti
If you recently logged in, you probably already noticed it: now, when you connect to Sherlock, you can see some new status information displayed right before your command prompt. New status information at login At login, you'll know...
New
Improvement

Persistent processes on Sherlock

by Kilian Cavalotti
There are many cases where having a persistent process (or service) running alongside computing jobs is of great benefit. For instance, when data is stored in a database format to allow for highly efficient queries, jobs that want to...
Scheduler
Documentation

Running containers on Sherlock

by Kilian Cavalotti
Documentation
Software
Have you ever wanted to run Docker containers on Sherlock, and skip the hassle of figuring out your application dependencies, installing them, compiling the code, resolving compilation errors, finding missing libraries, or making sure...

Sherlock now welcomes lab-contributed software

by Kilian Cavalotti
Have you ever spent hours compiling and tuning software, put together a complex workflow combining multiple software parts, or just installed the latest version of the brand new software tools you're developing on Sherlock? And wondered...
Software
Announce
New

MySQL on Sherlock

by Kilian Cavalotti
Have you ever wondered how you could use a database server on Sherlock? Or wanted to run jobs that query data from a SQL database? Or even better, multiple jobs that would interact with the same database? Have you ever wanted to store...
Improvement
Software
Documentation

Spark on Sherlock

by Kilian Cavalotti
Apache Spark is now available on Sherlock, via the spark module: $ ml spark We also added some new documentation and example job scripts, so if you ever needed to run Spark jobs on Sherlock, please take a look at those and let us know...
Improvement
Documentation
Software

Sherlock welcomes Volta

by Sherlock Team
The Sherlock 2.0 cluster now features the latest generation of GPU accelerators: the NVIDIA Tesla V100. Each V100 GPU features 7.8 TFlops of double-precision (FP64) performance, up to 125 TFlops for deep-learning applications, 16GB of...
New
Hardware

New software modules

by Sherlock Team
If you haven't checked in a while, we're continuing to add more software modules on Sherlock 2.0. Among many others, the following additions will be of particular interest to the bioinformatics and genomics communities: star cufflinks...
Software
New

GPU compute modes

by Sherlock Team
We developed a new extension to allow users to change the compute mode of the GPUs allocated to their jobs. By default, GPUs are set in the "Exclusive Process" mode for best performance and ensure that only one process can use the GPU...
Improvement
New