over 6 years ago
Better error messages when submitting jobs
by Kilian Cavalotti
Sherlock now offers a better and more complete explanation when a job submission is rejected by the scheduler. What does it look like? In the most common cases, jobs that don't meet the requirements for the partition they're submitted...over 6 years ago
High priority QOS for owners
by Kilian Cavalotti
Today, we're introducing a new high-priority QOS for owner partitions. In groups which have purchased their own compute nodes on Sherlock, users can now submit jobs to their group partition using the --qos=high_p option: it will give...over 6 years ago
Sherlock now welcomes lab-contributed software
by Kilian Cavalotti
Have you ever spent hours compiling and tuning software, put together a complex workflow combining multiple software parts, or just installed the latest version of the brand new software tools you're developing on Sherlock? And wondered...over 6 years ago
MySQL on Sherlock
by Kilian Cavalotti
Have you ever wondered how you could use a database server on Sherlock? Or wanted to run jobs that query data from a SQL database? Or even better, multiple jobs that would interact with the same database? Have you ever wanted to store...over 6 years ago
Spark on Sherlock
by Kilian Cavalotti
Apache Spark is now available on Sherlock, via the spark module: $ ml spark We also added some new documentation and example job scripts, so if you ever needed to run Spark jobs on Sherlock, please take a look at those and let us know...almost 7 years ago
Tensorflow 1.7.0 now available
by Sherlock Team
Tensorflow 1.7.0, which features TensorRT integration, is now available on Sherlock 2.0. You can load it on Sherlock with: $ ml py-tensorflow/1.7.0_py27 > NB: As with all the other Tensorflow modules on Sherlock, Tensorflow 1.7.0...almost 7 years ago
New software modules
by Sherlock Team
If you haven't checked in a while, we're continuing to add more software modules on Sherlock 2.0. Among many others, the following additions will be of particular interest to the bioinformatics and genomics communities: star cufflinks...over 7 years ago
More software available
by Sherlock Team
New software has been installed on Sherlock 2.0: biology Module | Version | Category | URL :--- | :------ | :------- | :--- mrtrix|0.3.16|neurology|http://www.mrtrix.org afni|17.1.03|neurology|https://afni.nimh.nih.gov freesurfer|6.0...almost 8 years ago
New software available
by Sherlock Team
The following new software modules are available on Sherlock 2.0: devel Module | Version | Category | URL :--- | :------ | :------- | :--- gcc|6.3.0|compiler|http://gcc.gnu.org ifort|2017.u2|compiler|https://software.intel.com/en-us...